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All interfaces > All interologs > Interface groups > group4 > 2ASB_A_B

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Licorice
Surface

RNA

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Licorice
Surface

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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

2ASB_A
2ASB_B
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
A:217 [ARG] B:3 [A] 3.1 sugar:SC 87.74
A:217 [ARG] B:4 [C] 3.42 87.74
A:230 [ASN] B:1 [G] 2.87 base:SC 92.83
A:232 [LYS] B:1 [G] 4.35 76.26
A:232 [LYS] B:2 [A] 4.15 76.26
A:233 [GLY] B:1 [G] 3.52 83.72
A:236 [ILE] B:1 [G] 3.59 85.02
A:236 [ILE] B:2 [A] 3.58 85.02
A:237 [GLY] B:1 [G] 4.08 99.0
A:238 [PRO] B:1 [G] 4.85 30.54
A:239 [MET] B:1 [G] 3.65 54.98
A:240 [GLY] B:1 [G] 3.31 91.8
A:240 [GLY] B:2 [A] 4.21 91.8
A:243 [VAL] B:2 [A] 3.59 86.55
A:244 [ARG] B:2 [A] 3.48 54.41
A:244 [ARG] B:3 [A] 4.83 54.41
A:247 [MET] B:2 [A] 3.93 43.6
A:247 [MET] B:3 [A] 4.56 43.6
A:254 [LYS] B:3 [A] 3.65 77.07
A:254 [LYS] B:4 [C] 3.66 77.07
A:255 [ILE] B:2 [A] 3.16 88.51
A:255 [ILE] B:3 [A] 3.32 88.51
A:256 [ASP] B:2 [A] 3.92 93.01
A:256 [ASP] B:3 [A] 2.56 sugar:SC 93.01
A:257 [ILE] B:2 [A] 2.95 base:BB, base:BB 74.9
A:257 [ILE] B:3 [A] 4.21 74.9
A:258 [ILE] B:3 [A] 4.47 82.02
A:273 [SER] B:3 [A] 2.6 base:SC, base:SC 50.06
A:274 [PRO] B:3 [A] 3.75 84.75
A:274 [PRO] B:4 [C] 3.39 84.75
A:297 [PHE] B:5 [U] 2.75 base:BB 37.72
A:298 [GLN] B:5 [U] 3.77 55.6
A:299 [LEU] B:5 [U] 4.65 23.97
A:299 [LEU] B:7 [A] 3.27 23.97
A:300 [SER] B:5 [U] 3.38 base:BB 63.59
A:300 [SER] B:6 [C] 3.13 63.59
A:300 [SER] B:7 [A] 2.76 base:SC, base:SC 63.59
A:301 [LEU] B:4 [C] 3.65 6.89
A:301 [LEU] B:5 [U] 3.28 6.89
A:303 [ILE] B:7 [A] 3.36 87.77
A:303 [ILE] B:8 [A] 3.57 87.77
A:304 [GLY] B:6 [C] 4.01 96.78
A:304 [GLY] B:7 [A] 3.56 96.78
A:305 [LYS] B:6 [C] 3.8 62.55
A:305 [LYS] B:7 [A] 3.64 62.55
A:306 [GLU] B:7 [A] 2.8 19.23
A:306 [GLU] B:8 [A] 3.74 19.23
A:307 [GLY] B:7 [A] 3.61 91.21
A:307 [GLY] B:8 [A] 3.19 91.21
A:307 [GLY] B:10 [A] 4.66 91.21
A:310 [ALA] B:8 [A] 3.6 82.64
A:310 [ALA] B:10 [A] 3.8 82.64
A:311 [ARG] B:8 [A] 4.5 68.35
A:311 [ARG] B:10 [A] 3.39 68.35
A:311 [ARG] B:11 [G] 4.01 68.35
A:314 [ALA] B:10 [A] 3.49 76.78
A:315 [ARG] B:10 [A] 3.55 47.88
A:319 [TRP] B:10 [A] 4.36 30.03
A:320 [ARG] B:9 [U] 4.16 41.2
A:320 [ARG] B:10 [A] 3.75 41.2
A:321 [ILE] B:8 [A] 3.25 86.66
A:321 [ILE] B:9 [U] 3.32 86.66
A:321 [ILE] B:10 [A] 2.8 base:BB, base:BB 86.66
A:322 [ASP] B:8 [A] 3.94 55.64
A:322 [ASP] B:9 [U] 2.89 base:SC 55.64
A:323 [ILE] B:8 [A] 2.8 base:BB, base:BB 74.6
A:323 [ILE] B:9 [U] 4.94 74.6
A:324 [ARG] B:8 [A] 4.99 2.01

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group4 2ASB_A_B A: Transcription elongation protein nusa, Mycobacterium tuberculosis (genetically engineered) B: N/A P9WIV3 Prokaryotic type KH domain (KH-domain type II) ✔

Interologs

Total number of interologs for this interface: 1

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
2ASB_A_B 2ATW_A_B 0.98 0.98 0.29 0.91 Prokaryotic type KH domain (KH-domain type II) compare