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All interfaces > All interologs > Interface groups > group141 > 1URN_A_P vs 7DCO_X_G

Interface analysis


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Common contacts -

1URN_A
1URN_P
7DCO_X
7DCO_G
Conserved?
A:19 [GLU] P:8 [U] X:40 [ARG] G:519 [U] ✔
A:13 [TYR] P:9 [G] X:34 [TYR] G:520 [G] ✔
A:91 [SER] P:11 [A] X:110 [ARG] G:521 [U] ✔
A:90 [ASP] P:11 [A] X:109 [TYR] G:521 [U] ✔
A:87 [ALA] P:11 [A] X:107 [THR] G:521 [U] ✔
A:54 [GLN] P:9 [G] X:74 [PHE] G:520 [G] ✔
A:56 [PHE] P:11 [A] X:76 [TYR] G:521 [U] ✔
A:89 [THR] P:11 [A] X:108 [PHE] G:521 [U] ✔
A:19 [GLU] P:9 [G] X:40 [ARG] G:520 [G] ❌ 7DCO_X_G
A:80 [LYS] P:8 [U] X:100 [ARG] G:519 [U] ❌ 7DCO_X_G
A:16 [ASN] P:8 [U] X:37 [ASN] G:519 [U] ❌ 7DCO_X_G
A:16 [ASN] P:9 [G] X:37 [ASN] G:520 [G] ❌ 7DCO_X_G
A:52 [ARG] P:9 [G] X:72 [GLN] G:520 [G] ❌ 7DCO_X_G
A:85 [GLN] P:9 [G] X:105 [ASP] G:520 [G] ❌ 1URN_A_P
A:86 [TYR] P:9 [G] X:106 [HIS] G:520 [G] ❌ 1URN_A_P
A:87 [ALA] P:9 [G] X:107 [THR] G:520 [G] ❌ 1URN_A_P
A:89 [THR] P:9 [G] X:108 [PHE] G:520 [G] ❌ 1URN_A_P
A:52 [ARG] P:8 [U] X:72 [GLN] G:519 [U] ❌ 1URN_A_P
A:54 [GLN] P:11 [A] X:74 [PHE] G:521 [U] ❌ 1URN_A_P
A:54 [GLN] P:8 [U] X:74 [PHE] G:519 [U] ❌ 1URN_A_P
A:56 [PHE] P:9 [G] X:76 [TYR] G:520 [G] ❌ 1URN_A_P
A:19 [GLU] P:7 [U] X:40 [ARG] G:518 [U] ❌ 7DCO_G:518 no longer at interface
A:49 [LEU] P:7 [U] X:66 [GLU] G:518 [U] ❌ 7DCO_X:66, 7DCO_G:518 no longer at interface
A:52 [ARG] P:7 [U] X:72 [GLN] G:518 [U] ❌ 7DCO_G:518 no longer at interface
A:15 [ASN] P:8 [U] X:36 [GLY] G:519 [U] ❌ 7DCO_X:36 no longer at interface
A:15 [ASN] P:9 [G] X:36 [GLY] G:520 [G] ❌ 7DCO_X:36 no longer at interface
A:17 [LEU] P:9 [G] X:38 [LEU] G:520 [G] ❌ 7DCO_X:38 no longer at interface
A:11 [THR] P:11 [A] X:32 [TYR] G:521 [U] ❌ 7DCO_X:32 no longer at interface
A:49 [LEU] P:9 [G] X:66 [GLU] G:520 [G] ❌ 7DCO_X:66 no longer at interface
A:53 [GLY] P:9 [G] X:73 [GLY] G:520 [G] ❌ 7DCO_X:73 no longer at interface
A:83 [ARG] P:8 [U] X:103 [LYS] G:519 [U] ❌ 7DCO_X:103 no longer at interface
A:51 [MET] P:9 [G] X:71 [SER] G:520 [G] ❌ 7DCO_X:71 no longer at interface
A:51 [MET] P:11 [A] X:71 [SER] G:521 [U] ❌ 7DCO_X:71 no longer at interface
A:44 [LEU] P:11 [A] X:61 [ILE] G:521 [U] ❌ 7DCO_X:61 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
RNA-binding domain, RBD 0.64 2.53 0.12 0.73 0.13 0.88 0.5 0.42 0.54 0.17 0.50


Other pairs involving 1URN_A_P or 7DCO_X_G

Total number of entries: 26

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1A9N_B_Q 7DCO_X_G 0.31 0.63 3.58 0.12 RNA-binding domain, RBD compare
1A9N_B_Q 1URN_A_P 0.78 0.85 0.84 0.58 RNA-binding domain, RBD compare
1DRZ_A_B 1URN_A_P 0.93 0.95 0.28 0.83 RNA-binding domain, RBD compare
1G2E_A_B 1URN_A_P 0.54 0.62 3.07 0.1 RNA-binding domain, RBD compare
1M5O_C_B 1URN_A_P 0.96 0.93 0.59 0.93 RNA-binding domain, RBD compare
1SJ3_P_R 1URN_A_P 0.98 0.94 0.52 0.91 RNA-binding domain, RBD compare
1URN_A_P 5HO4_A_B 0.68 0.59 2.13 0.0 RNA-binding domain, RBD compare
1URN_A_P 4PKD_B_V 0.93 0.92 0.29 0.83 RNA-binding domain, RBD compare
1URN_A_P 4N0T_A_B 0.55 0.62 3.78 0.0 RNA-binding domain, RBD compare
1URN_A_P 7DCO_4_G 0.23 0.6 1.36 0.17 RNA-binding domain, RBD compare
1URN_A_P 5TF6_A_B 0.54 0.62 3.87 0.0 RNA-binding domain, RBD compare
1URN_A_P 5DDP_D_A 0.97 0.95 0.36 0.83 RNA-binding domain, RBD compare
1URN_A_P 7DCO_R_G 0.75 0.7 2.57 0.21 compare
1URN_A_P 6F4G_B_C 0.78 0.85 0.36 0.58 RNA-binding domain, RBD compare
1URN_A_P 6DCL_A_D 0.33 0.61 1.95 0.17 RNA-binding domain, RBD compare
1URN_A_P 2NZ4_A_P 0.94 0.92 0.36 0.83 RNA-binding domain, RBD compare
1URN_A_P 7DCO_X_G 0.42 0.64 2.53 0.12 RNA-binding domain, RBD compare
1URN_A_P 4PR6_A_B 0.93 0.94 0.27 0.83 RNA-binding domain, RBD compare
1URN_A_P 6F4H_A_B 0.95 0.94 0.32 0.72 RNA-binding domain, RBD compare
1URN_A_P 3MXH_P_R 0.97 0.87 0.95 0.78 RNA-binding domain, RBD compare
6CMN_A_D 7DCO_X_G 0.53 0.62 1.23 0.0 RNA-binding domain, RBD compare
6F4G_B_C 7DCO_X_G 0.33 0.62 3.54 0.12 RNA-binding domain, RBD compare
6F4H_A_B 7DCO_X_G 0.43 0.65 2.51 0.12 RNA-binding domain, RBD compare
6SQN_A_X 7DCO_X_G 0.45 0.66 2.52 0.12 RNA-binding domain, RBD compare
6XH2_A_D 7DCO_X_G 0.57 0.61 1.84 0.0 RNA-binding domain, RBD compare
6XH3_A_D 7DCO_X_G 0.50 0.63 1.21 0.0 RNA-binding domain, RBD compare