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All interfaces > All interologs > Interface groups > group141 > 2NZ4_A_P vs 3MXH_P_R

Interface analysis


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Common contacts -

2NZ4_A
2NZ4_P
3MXH_P
3MXH_R
Conserved?
A:19 [GLU] P:17B [A] P:19 [GLU] R:660 [A] ✔
A:19 [GLU] P:17C [U] P:19 [GLU] R:661 [U] ✔
A:19 [GLU] P:17D [U] P:19 [GLU] R:662 [U] ✔
A:19 [GLU] P:17E [G] P:19 [GLU] R:663 [G] ✔
A:13 [TYR] P:17E [G] P:13 [TYR] R:663 [G] ✔
A:13 [TYR] P:17F [C] P:13 [TYR] R:664 [C] ✔
A:91 [SER] P:17G [A] P:90 [ASP] R:665 [A] ✔
A:91 [SER] P:17H [C] P:90 [ASP] R:666 [C] ✔
A:15 [ASN] P:17D [U] P:15 [ASN] R:662 [U] ✔
A:15 [ASN] P:17E [G] P:15 [ASN] R:663 [G] ✔
A:90 [ASP] P:17G [A] P:89 [THR] R:665 [A] ✔
A:90 [ASP] P:17H [C] P:89 [THR] R:666 [C] ✔
A:87 [ALA] P:17F [C] P:87 [ALA] R:664 [C] ✔
A:87 [ALA] P:17G [A] P:87 [ALA] R:665 [A] ✔
A:17 [LEU] P:17E [G] P:17 [LEU] R:663 [G] ✔
A:11 [THR] P:17G [A] P:11 [THR] R:665 [A] ✔
A:49 [LEU] P:17B [A] P:49 [LEU] R:660 [A] ✔
A:49 [LEU] P:17C [U] P:49 [LEU] R:661 [U] ✔
A:49 [LEU] P:17E [G] P:49 [LEU] R:663 [G] ✔
A:49 [LEU] P:17L [G] P:49 [LEU] R:75 [G] ✔
A:22 [LYS] P:13 [G] P:22 [LYS] R:61 [A] ✔
A:22 [LYS] P:14 [C] P:22 [LYS] R:62 [A] ✔
A:53 [GLY] P:17E [G] P:53 [GLY] R:663 [G] ✔
A:54 [GLN] P:17E [G] P:54 [GLN] R:663 [G] ✔
A:54 [GLN] P:17F [C] P:54 [GLN] R:664 [C] ✔
A:48 [SER] P:17K [C] P:48 [SER] R:669 [C] ✔
A:48 [SER] P:17L [G] P:48 [SER] R:75 [G] ✔
A:51 [MET] P:17E [G] P:51 [MET] R:663 [G] ✔
A:51 [MET] P:17F [C] P:51 [MET] R:664 [C] ✔
A:51 [MET] P:17G [A] P:51 [MET] R:665 [A] ✔
A:86 [TYR] P:17F [C] P:86 [TYR] R:664 [C] ✔
A:85 [GLN] P:17F [C] P:85 [GLN] R:664 [C] ✔
A:80 [LYS] P:17D [U] P:80 [LYS] R:662 [U] ✔
A:20 [LYS] P:14 [C] P:20 [LYS] R:62 [A] ✔
A:20 [LYS] P:15 [A] P:20 [LYS] R:63 [A] ✔
A:20 [LYS] P:16 [C] P:20 [LYS] R:64 [C] ✔
A:16 [ASN] P:17D [U] P:16 [ASN] R:662 [U] ✔
A:16 [ASN] P:17E [G] P:16 [ASN] R:663 [G] ✔
A:44 [LEU] P:17G [A] P:44 [LEU] R:665 [A] ✔
A:44 [LEU] P:17H [C] P:44 [LEU] R:666 [C] ✔
A:56 [PHE] P:17F [C] P:56 [PHE] R:664 [C] ✔
A:56 [PHE] P:17G [A] P:56 [PHE] R:665 [A] ✔
A:92 [ASP] P:17H [C] P:91 [SER] R:666 [C] ✔
A:52 [ARG] P:17B [A] P:52 [ARG] R:660 [A] ✔
A:52 [ARG] P:17C [U] P:52 [ARG] R:661 [U] ✔
A:52 [ARG] P:17E [G] P:52 [ARG] R:663 [G] ✔
A:52 [ARG] P:17L [G] P:52 [ARG] R:75 [G] ✔
A:89 [THR] P:17F [C] P:88 [LYS] R:664 [C] ✔
A:89 [THR] P:17G [A] P:88 [LYS] R:665 [A] ✔
A:47 [ARG] P:14 [C] P:47 [ARG] R:62 [A] ✔
A:93 [ILE] P:17H [C] P:92 [ASP] R:666 [C] ✔
A:50 [LYS] P:17E [G] P:50 [LYS] R:663 [G] ✔
A:89 [THR] P:17H [C] P:88 [LYS] R:666 [C] ❌ 3MXH_P_R
A:47 [ARG] P:13 [G] P:47 [ARG] R:61 [A] ❌ 3MXH_P_R
A:47 [ARG] P:17K [C] P:47 [ARG] R:669 [C] ❌ 3MXH_P_R
A:47 [ARG] P:17L [G] P:47 [ARG] R:75 [G] ❌ 3MXH_P_R
A:50 [LYS] P:17L [G] P:50 [LYS] R:75 [G] ❌ 3MXH_P_R
A:50 [LYS] P:17K [C] P:50 [LYS] R:669 [C] ❌ 2NZ4_A_P
A:50 [LYS] P:17F [C] P:50 [LYS] R:664 [C] ❌ 2NZ4_A_P
A:50 [LYS] P:17G [A] P:50 [LYS] R:665 [A] ❌ 2NZ4_A_P
A:46 [SER] P:17J [C] P:46 [SER] R:668 [C] ❌ 3MXH_P:46, 3MXH_R:668 no longer at interface
A:92 [ASP] P:17I [U] P:91 [SER] R:667 [U] ❌ 3MXH_R:667 no longer at interface
A:46 [SER] P:17K [C] P:46 [SER] R:669 [C] ❌ 3MXH_P:46 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
RNA-binding domain, RBD 0.6 0.92 0.81 0.96 0.24 1.0 1.0 0.94 0.83 0.00 0.27


Other pairs involving 2NZ4_A_P or 3MXH_P_R

Total number of entries: 23

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1DRZ_A_B 2NZ4_A_P 0.97 0.65 0.35 0.93 RNA-binding domain, RBD compare
1DRZ_A_B 3MXH_P_R 0.92 0.65 0.96 0.78 RNA-binding domain, RBD compare
1URN_A_P 2NZ4_A_P 0.94 0.92 0.36 0.83 RNA-binding domain, RBD compare
1URN_A_P 3MXH_P_R 0.97 0.87 0.95 0.78 RNA-binding domain, RBD compare
3MXH_P_R 6F4H_A_B 0.95 0.91 0.91 0.59 RNA-binding domain, RBD compare
3MXH_P_R 5DDP_D_A 0.95 0.68 0.89 0.69 RNA-binding domain, RBD compare
3MXH_P_R 6SQN_A_X 0.91 0.88 0.96 0.7 RNA-binding domain, RBD compare
3MXH_P_R 4PR6_A_B 0.93 0.65 0.96 0.78 RNA-binding domain, RBD compare
3MXH_P_R 6F4G_B_C 0.80 0.77 0.94 0.46 RNA-binding domain, RBD compare
3MXH_P_R 4PKD_B_V 0.84 0.6 0.68 0.69 RNA-binding domain, RBD compare
1A9N_B_Q 2NZ4_A_P 0.79 0.83 0.54 0.5 RNA-binding domain, RBD compare
1A9N_B_Q 3MXH_P_R 0.79 0.78 1.0 0.46 RNA-binding domain, RBD compare
1M5O_C_B 3MXH_P_R 0.94 0.68 1.06 0.81 RNA-binding domain, RBD compare
1M5O_C_B 2NZ4_A_P 0.97 0.63 0.49 0.86 RNA-binding domain, RBD compare
2NZ4_A_P 4PKD_B_V 0.94 0.52 0.55 0.69 RNA-binding domain, RBD compare
2NZ4_A_P 3MXH_P_R 0.94 0.6 0.92 0.81 RNA-binding domain, RBD compare
2NZ4_A_P 6F4G_B_C 0.85 0.8 0.45 0.43 RNA-binding domain, RBD compare
2NZ4_A_P 5DDP_D_A 0.96 0.73 0.46 0.85 RNA-binding domain, RBD compare
2NZ4_A_P 4PR6_A_B 0.96 0.66 0.34 0.85 RNA-binding domain, RBD compare
2NZ4_A_P 6F4H_A_B 0.92 0.95 0.41 0.7 RNA-binding domain, RBD compare
2NZ4_A_P 6SQN_A_X 0.96 0.93 0.39 0.8 RNA-binding domain, RBD compare
1SJ3_P_R 3MXH_P_R 0.95 0.64 1.0 0.78 RNA-binding domain, RBD compare
1SJ3_P_R 2NZ4_A_P 0.94 0.65 0.37 0.91 RNA-binding domain, RBD compare