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All interfaces > All interologs > Interface groups > group141 > 6CMN_A_D vs 6DCL_A_D

Interface analysis


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Common contacts -

6CMN_A
6CMN_D
6DCL_A
6DCL_D
Conserved?
A:13 [TYR] D:35 [A] A:108 [PHE] D:9 [A] ✔
A:87 [ALA] D:35 [A] A:180 [ALA] D:9 [A] ✔
A:88 [LYS] D:35 [A] A:181 [LEU] D:9 [A] ✔
A:54 [GLN] D:34 [G] A:148 [PHE] D:8 [U] ✔
A:54 [GLN] D:35 [A] A:148 [PHE] D:9 [A] ✔
A:54 [GLN] D:36 [G] A:148 [PHE] D:10 [G] ✔
A:86 [TYR] D:35 [A] A:179 [LYS] D:9 [A] ✔
A:85 [GLN] D:35 [A] A:178 [ARG] D:9 [A] ✔
A:56 [PHE] D:35 [A] A:150 [PHE] D:9 [A] ✔
A:52 [ARG] D:34 [G] A:146 [ARG] D:8 [U] ✔
A:52 [ARG] D:36 [G] A:146 [ARG] D:10 [G] ✔
A:15 [ASN] D:35 [A] A:110 [GLY] D:9 [A] ❌ 6DCL_A_D
A:50 [THR] D:34 [G] A:144 [LYS] D:8 [U] ❌ 6DCL_A_D
A:13 [TYR] D:34 [G] A:108 [PHE] D:8 [U] ❌ 6CMN_A_D
A:15 [ASN] D:34 [G] A:110 [GLY] D:8 [U] ❌ 6CMN_A_D
A:52 [ARG] D:35 [A] A:146 [ARG] D:9 [A] ❌ 6CMN_A_D
A:56 [PHE] D:36 [G] A:150 [PHE] D:10 [G] ❌ 6CMN_A_D
A:85 [GLN] D:34 [G] A:178 [ARG] D:8 [U] ❌ 6CMN_A_D
A:87 [ALA] D:36 [G] A:180 [ALA] D:10 [G] ❌ 6CMN_A_D
A:88 [LYS] D:36 [G] A:181 [LEU] D:10 [G] ❌ 6CMN_A_D
A:6 [THR] D:35 [A] A:99 [GLY] D:9 [A] ❌ 6DCL_A:99 no longer at interface
A:48 [GLN] D:35 [A] A:139 [ASP] D:9 [A] ❌ 6DCL_A:139 no longer at interface
A:48 [GLN] D:36 [G] A:139 [ASP] D:10 [G] ❌ 6DCL_A:139 no longer at interface
A:49 [ARG] D:36 [G] A:142 [SER] D:10 [G] ❌ 6DCL_A:142 no longer at interface
A:11 [THR] D:36 [G] A:106 [LYS] D:10 [G] ❌ 6CMN_A:11 no longer at interface
A:16 [ASN] D:34 [G] A:111 [GLY] D:8 [U] ❌ 6CMN_A:16 no longer at interface
A:17 [LEU] D:34 [G] A:112 [ILE] D:8 [U] ❌ 6CMN_A:17 no longer at interface
A:44 [LEU] D:36 [G] A:135 [GLU] D:10 [G] ❌ 6CMN_A:44 no longer at interface
A:46 [PRO] D:36 [G] A:137 [MET] D:10 [G] ❌ 6CMN_A:46 no longer at interface
A:53 [GLY] D:34 [G] A:147 [GLY] D:8 [U] ❌ 6CMN_A:53 no longer at interface
A:83 [ALA] D:34 [G] A:176 [GLU] D:8 [U] ❌ 6CMN_A:83 no longer at interface
A:89 [THR] D:36 [G] A:182 [SER] D:10 [G] ❌ 6CMN_A:89 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
RNA-binding domain, RBD 0.61 1.72 0.16 0.74 0.06 0.63 0.6 0.48 0.47 0.36 0.57


Other pairs involving 6CMN_A_D or 6DCL_A_D

Total number of entries: 11

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1URN_A_P 6DCL_A_D 0.33 0.61 1.95 0.17 RNA-binding domain, RBD compare
1A9N_B_Q 6DCL_A_D 0.32 0.6 2.71 0.2 RNA-binding domain, RBD compare
6CMN_A_D 6XH3_A_D 0.80 0.97 1.27 0.84 RNA-binding domain, RBD compare
6CMN_A_D 6XH2_A_D 0.99 0.99 0.17 0.95 RNA-binding domain, RBD compare
6CMN_A_D 7DCO_X_G 0.53 0.62 1.23 0.0 RNA-binding domain, RBD compare
6CMN_A_D 6DCL_A_D 0.48 0.61 1.72 0.16 RNA-binding domain, RBD compare
6CMN_A_D 7DCO_4_G 0.65 0.58 1.84 0.12 RNA-binding domain, RBD compare
6DCL_A_D 6F4H_A_B 0.33 0.63 1.94 0.17 RNA-binding domain, RBD compare
6DCL_A_D 6SQN_A_X 0.28 0.63 1.96 0.13 RNA-binding domain, RBD compare
6DCL_A_D 6XH2_A_D 0.48 0.6 1.96 0.14 RNA-binding domain, RBD compare
6DCL_A_D 6F4G_B_C 0.32 0.61 2.78 0.26 RNA-binding domain, RBD compare