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All interfaces > All interologs > Interface groups > group141 > 6F4G_B_C vs 7DCO_X_G

Interface analysis


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Common contacts -

6F4G_B
6F4G_C
7DCO_X
7DCO_G
Conserved?
B:53 [PHE] C:13 [C] X:76 [TYR] G:521 [U] ✔
B:51 [GLN] C:12 [G] X:74 [PHE] G:520 [G] ✔
B:51 [GLN] C:13 [C] X:74 [PHE] G:521 [U] ✔
B:85 [LYS] C:13 [C] X:108 [PHE] G:521 [U] ✔
B:86 [SER] C:13 [C] X:109 [TYR] G:521 [U] ✔
B:84 [SER] C:13 [C] X:107 [THR] G:521 [U] ✔
B:10 [TYR] C:12 [G] X:34 [TYR] G:520 [G] ✔
B:82 [ALA] C:13 [C] X:105 [ASP] G:521 [U] ❌ 7DCO_X_G
B:13 [ASN] C:11 [U] X:37 [ASN] G:519 [U] ❌ 7DCO_X_G
B:13 [ASN] C:12 [G] X:37 [ASN] G:520 [G] ❌ 7DCO_X_G
B:83 [TYR] C:13 [C] X:106 [HIS] G:521 [U] ❌ 7DCO_X_G
B:16 [GLU] C:12 [G] X:40 [ARG] G:520 [G] ❌ 7DCO_X_G
B:77 [LYS] C:11 [U] X:100 [ARG] G:519 [U] ❌ 7DCO_X_G
B:49 [ARG] C:12 [G] X:72 [GLN] G:520 [G] ❌ 7DCO_X_G
B:10 [TYR] C:13 [C] X:34 [TYR] G:521 [U] ❌ 7DCO_X_G
B:77 [LYS] C:8 [U] X:100 [ARG] G:517 [U] ❌ 6F4G_B_C
B:82 [ALA] C:12 [G] X:105 [ASP] G:520 [G] ❌ 6F4G_B_C
B:83 [TYR] C:12 [G] X:106 [HIS] G:520 [G] ❌ 6F4G_B_C
B:84 [SER] C:12 [G] X:107 [THR] G:520 [G] ❌ 6F4G_B_C
B:85 [LYS] C:12 [G] X:108 [PHE] G:520 [G] ❌ 6F4G_B_C
B:87 [ASP] C:13 [C] X:110 [ARG] G:521 [U] ❌ 6F4G_B_C
B:89 [ASP] C:13 [C] X:112 [LYS] G:521 [U] ❌ 6F4G_B_C
B:13 [ASN] C:8 [U] X:37 [ASN] G:517 [U] ❌ 6F4G_B_C
B:16 [GLU] C:11 [U] X:40 [ARG] G:519 [U] ❌ 6F4G_B_C
B:49 [ARG] C:11 [U] X:72 [GLN] G:519 [U] ❌ 6F4G_B_C
B:51 [GLN] C:11 [U] X:74 [PHE] G:519 [U] ❌ 6F4G_B_C
B:53 [PHE] C:12 [G] X:76 [TYR] G:520 [G] ❌ 6F4G_B_C
B:46 [LEU] C:10 [U] X:66 [GLU] G:518 [U] ❌ 7DCO_X:66, 7DCO_G:518 no longer at interface
B:16 [GLU] C:10 [U] X:40 [ARG] G:518 [U] ❌ 7DCO_G:518 no longer at interface
B:49 [ARG] C:10 [U] X:72 [GLN] G:518 [U] ❌ 7DCO_G:518 no longer at interface
B:14 [LEU] C:12 [G] X:38 [LEU] G:520 [G] ❌ 7DCO_X:38 no longer at interface
B:12 [ASN] C:11 [U] X:36 [GLY] G:519 [U] ❌ 7DCO_X:36 no longer at interface
B:12 [ASN] C:12 [G] X:36 [GLY] G:520 [G] ❌ 7DCO_X:36 no longer at interface
B:46 [LEU] C:12 [G] X:66 [GLU] G:520 [G] ❌ 7DCO_X:66 no longer at interface
B:48 [MET] C:12 [G] X:71 [SER] G:520 [G] ❌ 7DCO_X:71 no longer at interface
B:48 [MET] C:13 [C] X:71 [SER] G:521 [U] ❌ 7DCO_X:71 no longer at interface
B:50 [GLY] C:12 [G] X:73 [GLY] G:520 [G] ❌ 7DCO_X:73 no longer at interface
B:80 [GLN] C:11 [U] X:103 [LYS] G:519 [U] ❌ 7DCO_X:103 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
RNA-binding domain, RBD 0.62 3.54 0.12 0.74 0.14 0.94 0.67 0.33 0.31 0.08 0.35


Other pairs involving 6F4G_B_C or 7DCO_X_G

Total number of entries: 27

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1DRZ_A_B 6F4G_B_C 0.80 0.83 0.38 0.43 RNA-binding domain, RBD compare
4ED5_A_D 6F4G_B_C 0.57 0.62 2.44 0.1 RNA-binding domain, RBD compare
1G2E_A_B 6F4G_B_C 0.57 0.61 3.03 0.15 RNA-binding domain, RBD compare
1URN_A_P 6F4G_B_C 0.78 0.85 0.36 0.58 RNA-binding domain, RBD compare
4PR6_A_B 6F4G_B_C 0.80 0.83 0.4 0.46 RNA-binding domain, RBD compare
3MXH_P_R 6F4G_B_C 0.80 0.77 0.94 0.46 RNA-binding domain, RBD compare
1A9N_B_Q 6F4G_B_C 0.94 0.92 0.25 0.79 RNA-binding domain, RBD compare
5TF6_A_B 6F4G_B_C 0.58 0.61 3.75 0.0 RNA-binding domain, RBD compare
1M5O_C_B 6F4G_B_C 0.81 0.81 0.4 0.5 RNA-binding domain, RBD compare
6DCL_A_D 6F4G_B_C 0.32 0.61 2.78 0.26 RNA-binding domain, RBD compare
4N0T_A_B 6F4G_B_C 0.58 0.61 3.62 0.0 RNA-binding domain, RBD compare
4PKD_B_V 6F4G_B_C 0.81 0.81 0.46 0.5 RNA-binding domain, RBD compare
2NZ4_A_P 6F4G_B_C 0.85 0.8 0.45 0.43 RNA-binding domain, RBD compare
1SJ3_P_R 6F4G_B_C 0.83 0.83 0.4 0.55 RNA-binding domain, RBD compare
5DDP_D_A 6F4G_B_C 0.82 0.81 0.36 0.46 RNA-binding domain, RBD compare
6F4G_B_C 6F4H_A_B 0.81 0.87 0.36 0.5 RNA-binding domain, RBD compare
6F4G_B_C 6SQN_A_X 0.91 0.87 0.39 0.6 RNA-binding domain, RBD compare
6F4G_B_C 7DCO_R_G 0.76 0.68 2.57 0.14 compare
6XH2_A_D 7DCO_X_G 0.57 0.61 1.84 0.0 RNA-binding domain, RBD compare
6F4G_B_C 7DCO_X_G 0.33 0.62 3.54 0.12 RNA-binding domain, RBD compare
1URN_A_P 7DCO_X_G 0.42 0.64 2.53 0.12 RNA-binding domain, RBD compare
6XH3_A_D 7DCO_X_G 0.50 0.63 1.21 0.0 RNA-binding domain, RBD compare
1A9N_B_Q 7DCO_X_G 0.31 0.63 3.58 0.12 RNA-binding domain, RBD compare
6SQN_A_X 7DCO_X_G 0.45 0.66 2.52 0.12 RNA-binding domain, RBD compare
6CMN_A_D 7DCO_X_G 0.53 0.62 1.23 0.0 RNA-binding domain, RBD compare
6F4H_A_B 7DCO_X_G 0.43 0.65 2.51 0.12 RNA-binding domain, RBD compare
6F4G_B_C 7DCO_p_H 0.23 0.65 0.62 0.14 RNA-binding domain, RBD compare