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All interfaces > All interologs > Interface groups > group29 > 7BL4_9_A

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Licorice
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Licorice
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Chain
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Hydrophobicity
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Conservation*

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Rim - Core

Contacts -

7BL4_9
7BL4_A
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
9:1 [MET] A:2531 [A] 3.28 76.7
9:1 [MET] A:2659 [G] 3.28 76.7
9:1 [MET] A:2660 [A] 2.83 base:BB, base:BB 76.7
9:1 [MET] A:2661 [G] 4.25 76.7
9:2 [LYS] A:2660 [A] 4.51 55.96
9:10 [LEU] A:2471 [A] 4.62 A:2479 [U] 5.24
9:21 [VAL] A:2493 [U] 2.85 A:2459 [A] sugar:BB 72.85
9:21 [VAL] A:2494 [G] 4.91 A:2457 [U] 72.85
9:22 [SER] A:2492 [U] 4.65 A:2460 [U] 81.65
9:22 [SER] A:2493 [U] 3.31 A:2459 [A] 81.65
9:23 [PHE] A:2493 [U] 4.33 A:2459 [A] 59.54
9:23 [PHE] A:2494 [G] 4.29 A:2457 [U] 59.54
9:23 [PHE] A:2602 [A] 4.91 59.54
9:25 [ARG] A:2451 [A] 3.61 A:2447 [G] 75.54
9:25 [ARG] A:2452 [C] 3.03 75.54
9:25 [ARG] A:2493 [U] 4.82 A:2459 [A] 75.54
9:25 [ARG] A:2494 [G] 2.42 A:2457 [U] 75.54
9:26 [GLU] A:2451 [A] 2.81 A:2447 [G] sugar:BB 50.16
9:26 [GLU] A:2452 [C] 3.12 50.16
9:26 [GLU] A:2506 [U] 4.47 A:2583 [G] 50.16
9:26 [GLU] A:2583 [G] 3.66 A:2506 [U] base:SC 50.16
9:26 [GLU] A:2584 [U] 4.73 50.16
9:27 [LYS] A:2451 [A] 2.82 A:2447 [G] base:BB 50.16
9:27 [LYS] A:2452 [C] 3.32 50.16
9:27 [LYS] A:2505 [G] 2.9 50.16
9:27 [LYS] A:2506 [U] 3.85 A:2583 [G] sugar:BB 50.16
9:28 [TYR] A:2062 [A] 3.7 29.57
9:28 [TYR] A:2063 [C] 4.03 A:2450 [A] 29.57
9:28 [TYR] A:2451 [A] 4.24 A:2447 [G] 29.57
9:28 [TYR] A:2503 [A] 4.29 29.57
9:28 [TYR] A:2504 [U] 4.54 29.57
9:28 [TYR] A:2505 [G] 3.35 29.57
9:29 [ILE] A:2451 [A] 3.61 A:2447 [G] 21.34
9:29 [ILE] A:2584 [U] 3.16 21.34
9:30 [PRO] A:2450 [A] 4.97 A:2063 [C] 57.75
9:30 [PRO] A:2451 [A] 3.37 A:2447 [G] 57.75
9:31 [LYS] A:2601 [C] 4.6 A:2592 [G] 40.03
9:31 [LYS] A:2602 [A] 3.18 sugar:SC 40.03
9:32 [GLY] A:2602 [A] 3.01 sugar:BB 70.28
9:33 [GLY] A:2602 [A] 3.21 65.46
9:34 [PRO] A:2602 [A] 3.88 89.14
9:52 [ASN] A:2661 [G] 3.24 base:BB 59.53
9:52 [ASN] A:2662 [A] 2.64 sugar:SC 59.53
9:54 [ASN] A:2660 [A] 2.94 base:SC, base:SC 62.07
9:54 [ASN] A:2661 [G] 3.02 62.07
9:55 [THR] A:2660 [A] 4.95 67.39
9:60 [ARG] A:2473 [U] 4.11 45.35
9:61 [PHE] A:2472 [G] 3.72 A:2478 [A] 22.07
9:61 [PHE] A:2473 [U] 4.04 22.07
9:61 [PHE] A:2529 [G] 3.46 A:2475 [C] 22.07
9:62 [GLU] A:2472 [G] 2.93 A:2478 [A] 46.28
9:62 [GLU] A:2473 [U] 2.64 46.28
9:63 [LYS] A:2529 [G] 3.23 A:2475 [C] 56.27
9:66 [ARG] A:2480 [C] 3.53 A:2470 [G] sugar:SC 45.49
9:72 [ASN] A:2462 [C] 3.99 A:2488 [G] 59.86
9:75 [SER] A:2492 [U] 3.2 A:2460 [U] sugar:SC 39.84
9:75 [SER] A:2493 [U] 4.08 A:2459 [A] 39.84
9:76 [ARG] A:2507 [C] 2.32 A:2582 [G] sugar:SC 66.28
9:76 [ARG] A:2508 [G] 3.13 A:2580 [U] 66.28
9:76 [ARG] A:2555 [U] 3.32 base:BB 66.28
9:76 [ARG] A:2573 [C] 3.82 66.28
9:77 [ASP] A:2554 [U] 3.51 55.79
9:77 [ASP] A:2555 [U] 2.84 55.79
9:77 [ASP] A:2556 [C] 4.19 A:2552 [U] 55.79
9:78 [CYS] A:2555 [U] 3.5 52.71
9:78 [CYS] A:2556 [C] 3.61 A:2552 [U] 52.71
9:79 [THR] A:2556 [C] 2.59 A:2552 [U] base:BB, sugar:BB 60.16
9:79 [THR] A:2557 [G] 3.33 A:2551 [C] 60.16
9:80 [GLY] A:2556 [C] 4.47 A:2552 [U] 96.0
9:80 [GLY] A:2557 [G] 4.25 A:2551 [C] 96.0
9:80 [GLY] A:2558 [C] 4.65 A:2550 [G] 96.0
9:81 [LYS] A:2557 [G] 3.22 A:2551 [C] 49.23
9:81 [LYS] A:2558 [C] 3.34 A:2550 [G] 49.23
9:82 [ARG] A:2557 [G] 4.71 A:2551 [C] 65.38
9:82 [ARG] A:2558 [C] 2.88 A:2550 [G] 65.38
9:82 [ARG] A:2559 [C] 4.53 A:2549 [G] 65.38
9:125 [LEU] A:1942 [C] 4.26 50.42
9:125 [LEU] A:1943 [U] 4.19 50.42
9:128 [THR] A:1941 [C] 3.94 sugar:BB 38.08
9:128 [THR] A:1942 [C] 4.8 38.08
9:129 [ARG] A:1941 [C] 4.39 53.62
9:129 [ARG] A:1942 [C] 2.88 53.62
9:129 [ARG] A:1943 [U] 4.23 53.62
9:129 [ARG] A:1944 [U] 4.8 53.62
9:130 [PHE] A:1941 [C] 4.82 69.92
9:131 [LYS] A:1941 [C] 3.11 sugar:BB 48.99
9:131 [LYS] A:2602 [A] 4.78 48.99
9:131 [LYS] A:2603 [G] 4.03 A:2591 [C] 48.99
9:132 [SER] A:1941 [C] 4.5 73.96
9:132 [SER] A:1965 [C] 3.16 base:SC 73.96
9:133 [SER] A:1965 [C] 4.7 64.59
9:133 [SER] A:1966 [A] 2.28 base:SC 64.59
9:136 [ARG] A:2601 [C] 2.85 A:2592 [G] sugar:SC 60.9
9:136 [ARG] A:2602 [A] 3.08 60.9
9:136 [ARG] A:2603 [G] 2.55 A:2591 [C] 60.9
9:137 [THR] A:2602 [A] 3.53 52.92
9:139 [ARG] A:2493 [U] 4.5 A:2459 [A] 36.67
9:139 [ARG] A:2494 [G] 4.26 A:2457 [U] 36.67
9:180 [SER] A:2660 [A] 4.98 91.83
9:181 [ALA] A:2660 [A] 3.1 68.88
9:181 [ALA] A:2661 [G] 4.79 68.88
9:182 [ALA] A:2660 [A] 3.59 87.99
9:185 [LYS] A:1095 [A] 3.8 78.81
9:189 [TYR] A:1095 [A] 2.93 base/AA stacks 94.21
9:189 [TYR] A:1096 [A] 4.66 94.21
9:190 [PRO] A:1067 [A] 4.12 82.45
9:191 [PHE] A:1067 [A] 3.19 base/AA stacks 96.73
9:194 [LEU] A:1067 [A] 4.81 73.9
9:198 [LEU] A:2660 [A] 3.31 76.29
9:199 [GLY] A:2660 [A] 4.05 93.31
9:200 [VAL] A:2660 [A] 3.39 56.44
9:200 [VAL] A:2661 [G] 3.26 56.44
9:202 [ARG] A:2661 [G] 4.71 13.75
9:210 [VAL] A:2660 [A] 4.93 62.32
9:218 [ILE] A:1067 [A] 4.77 84.12
9:225 [ALA] A:1066 [U] 3.68 62.96
9:225 [ALA] A:1067 [A] 2.7 62.96
9:226 [GLY] A:1067 [A] 3.65 91.19

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group29 7BL4_9_A 9: Gtpase obge/cgta, Escherichia coli (strain k12) (natural) A: 23s ribosomal RNA, Escherichia coli (strain k12) (natural) P42641 P-loop containing nucleoside triphosphate hydrolases & Obg GTP-binding protein N-terminal domain Bacterial large subunit ribosomal RNA ✘

Interologs

Total number of interologs for this interface: 1

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
7BL4_9_A 7OF7_x_A 0.71 0.97 2.76 0.24 Obg GTP-binding protein N-terminal domain Bacterial large subunit ribosomal RNA compare