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All interfaces > All interologs > Interface groups > group141 > 1URN_A_P vs 3MXH_P_R

Interface analysis


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Common contacts -

1URN_A
1URN_P
3MXH_P
3MXH_R
Conserved?
A:19 [GLU] P:6 [A] P:19 [GLU] R:660 [A] ✔
A:19 [GLU] P:7 [U] P:19 [GLU] R:661 [U] ✔
A:19 [GLU] P:8 [U] P:19 [GLU] R:662 [U] ✔
A:19 [GLU] P:9 [G] P:19 [GLU] R:663 [G] ✔
A:13 [TYR] P:9 [G] P:13 [TYR] R:663 [G] ✔
A:13 [TYR] P:10 [C] P:13 [TYR] R:664 [C] ✔
A:91 [SER] P:11 [A] P:90 [ASP] R:665 [A] ✔
A:91 [SER] P:12 [C] P:90 [ASP] R:666 [C] ✔
A:15 [ASN] P:8 [U] P:15 [ASN] R:662 [U] ✔
A:15 [ASN] P:9 [G] P:15 [ASN] R:663 [G] ✔
A:90 [ASP] P:11 [A] P:89 [THR] R:665 [A] ✔
A:90 [ASP] P:12 [C] P:89 [THR] R:666 [C] ✔
A:87 [ALA] P:10 [C] P:87 [ALA] R:664 [C] ✔
A:87 [ALA] P:11 [A] P:87 [ALA] R:665 [A] ✔
A:17 [LEU] P:9 [G] P:17 [LEU] R:663 [G] ✔
A:11 [THR] P:11 [A] P:11 [THR] R:665 [A] ✔
A:49 [LEU] P:6 [A] P:49 [LEU] R:660 [A] ✔
A:49 [LEU] P:7 [U] P:49 [LEU] R:661 [U] ✔
A:49 [LEU] P:9 [G] P:49 [LEU] R:663 [G] ✔
A:49 [LEU] P:16 [G] P:49 [LEU] R:75 [G] ✔
A:22 [LYS] P:1 [A] P:22 [LYS] R:61 [A] ✔
A:22 [LYS] P:2 [A] P:22 [LYS] R:62 [A] ✔
A:53 [GLY] P:9 [G] P:53 [GLY] R:663 [G] ✔
A:54 [GLN] P:9 [G] P:54 [GLN] R:663 [G] ✔
A:54 [GLN] P:10 [C] P:54 [GLN] R:664 [C] ✔
A:48 [SER] P:15 [C] P:48 [SER] R:669 [C] ✔
A:48 [SER] P:16 [G] P:48 [SER] R:75 [G] ✔
A:51 [MET] P:9 [G] P:51 [MET] R:663 [G] ✔
A:51 [MET] P:10 [C] P:51 [MET] R:664 [C] ✔
A:51 [MET] P:11 [A] P:51 [MET] R:665 [A] ✔
A:86 [TYR] P:10 [C] P:86 [TYR] R:664 [C] ✔
A:85 [GLN] P:10 [C] P:85 [GLN] R:664 [C] ✔
A:80 [LYS] P:8 [U] P:80 [LYS] R:662 [U] ✔
A:16 [ASN] P:8 [U] P:16 [ASN] R:662 [U] ✔
A:16 [ASN] P:9 [G] P:16 [ASN] R:663 [G] ✔
A:44 [LEU] P:11 [A] P:44 [LEU] R:665 [A] ✔
A:44 [LEU] P:12 [C] P:44 [LEU] R:666 [C] ✔
A:56 [PHE] P:10 [C] P:56 [PHE] R:664 [C] ✔
A:56 [PHE] P:11 [A] P:56 [PHE] R:665 [A] ✔
A:92 [ASP] P:12 [C] P:91 [SER] R:666 [C] ✔
A:52 [ARG] P:6 [A] P:52 [ARG] R:660 [A] ✔
A:52 [ARG] P:7 [U] P:52 [ARG] R:661 [U] ✔
A:52 [ARG] P:9 [G] P:52 [ARG] R:663 [G] ✔
A:52 [ARG] P:16 [G] P:52 [ARG] R:75 [G] ✔
A:89 [THR] P:10 [C] P:88 [LYS] R:664 [C] ✔
A:89 [THR] P:11 [A] P:88 [LYS] R:665 [A] ✔
A:93 [ILE] P:12 [C] P:92 [ASP] R:666 [C] ✔
A:50 [LYS] P:9 [G] P:50 [LYS] R:663 [G] ✔
A:50 [LYS] P:10 [C] P:50 [LYS] R:664 [C] ✔
A:50 [LYS] P:11 [A] P:50 [LYS] R:665 [A] ✔
A:49 [LEU] P:15 [C] P:49 [LEU] R:669 [C] ❌ 3MXH_P_R
A:89 [THR] P:12 [C] P:88 [LYS] R:666 [C] ❌ 3MXH_P_R
A:47 [ARG] P:16 [G] P:47 [ARG] R:75 [G] ❌ 3MXH_P_R
A:50 [LYS] P:16 [G] P:50 [LYS] R:75 [G] ❌ 3MXH_P_R
A:47 [ARG] P:2 [A] P:47 [ARG] R:62 [A] ❌ 1URN_A_P
A:50 [LYS] P:15 [C] P:50 [LYS] R:669 [C] ❌ 1URN_A_P
A:92 [ASP] P:13 [U] P:91 [SER] R:667 [U] ❌ 3MXH_R:667 no longer at interface
A:20 [LYS] P:3 [U] P:20 [LYS] R:63 [A] ❌ 1URN_A:20, 1URN_P:3 no longer at interface
A:20 [LYS] P:4 [C] P:20 [LYS] R:64 [C] ❌ 1URN_A:20, 1URN_P:4 no longer at interface
A:83 [ARG] P:8 [U] P:83 [ARG] R:662 [U] ❌ 3MXH_P:83 no longer at interface
A:20 [LYS] P:2 [A] P:20 [LYS] R:62 [A] ❌ 1URN_A:20 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
RNA-binding domain, RBD 0.87 0.95 0.78 0.97 0.39 0.96 0.92 0.97 0.86 0.61 0.45


Other pairs involving 1URN_A_P or 3MXH_P_R

Total number of entries: 30

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1DRZ_A_B 1URN_A_P 0.93 0.95 0.28 0.83 RNA-binding domain, RBD compare
1DRZ_A_B 3MXH_P_R 0.92 0.65 0.96 0.78 RNA-binding domain, RBD compare
1G2E_A_B 1URN_A_P 0.54 0.62 3.07 0.1 RNA-binding domain, RBD compare
1URN_A_P 5HO4_A_B 0.68 0.59 2.13 0.0 RNA-binding domain, RBD compare
1URN_A_P 4PKD_B_V 0.93 0.92 0.29 0.83 RNA-binding domain, RBD compare
1URN_A_P 4N0T_A_B 0.55 0.62 3.78 0.0 RNA-binding domain, RBD compare
1URN_A_P 7DCO_4_G 0.23 0.6 1.36 0.17 RNA-binding domain, RBD compare
1URN_A_P 5TF6_A_B 0.54 0.62 3.87 0.0 RNA-binding domain, RBD compare
1URN_A_P 5DDP_D_A 0.97 0.95 0.36 0.83 RNA-binding domain, RBD compare
1URN_A_P 7DCO_R_G 0.75 0.7 2.57 0.21 compare
1URN_A_P 6F4G_B_C 0.78 0.85 0.36 0.58 RNA-binding domain, RBD compare
1URN_A_P 6DCL_A_D 0.33 0.61 1.95 0.17 RNA-binding domain, RBD compare
1URN_A_P 2NZ4_A_P 0.94 0.92 0.36 0.83 RNA-binding domain, RBD compare
1URN_A_P 7DCO_X_G 0.42 0.64 2.53 0.12 RNA-binding domain, RBD compare
1URN_A_P 4PR6_A_B 0.93 0.94 0.27 0.83 RNA-binding domain, RBD compare
1URN_A_P 6F4H_A_B 0.95 0.94 0.32 0.72 RNA-binding domain, RBD compare
1URN_A_P 3MXH_P_R 0.97 0.87 0.95 0.78 RNA-binding domain, RBD compare
3MXH_P_R 6F4H_A_B 0.95 0.91 0.91 0.59 RNA-binding domain, RBD compare
3MXH_P_R 5DDP_D_A 0.95 0.68 0.89 0.69 RNA-binding domain, RBD compare
3MXH_P_R 6SQN_A_X 0.91 0.88 0.96 0.7 RNA-binding domain, RBD compare
3MXH_P_R 4PR6_A_B 0.93 0.65 0.96 0.78 RNA-binding domain, RBD compare
3MXH_P_R 6F4G_B_C 0.80 0.77 0.94 0.46 RNA-binding domain, RBD compare
3MXH_P_R 4PKD_B_V 0.84 0.6 0.68 0.69 RNA-binding domain, RBD compare
1A9N_B_Q 1URN_A_P 0.78 0.85 0.84 0.58 RNA-binding domain, RBD compare
1A9N_B_Q 3MXH_P_R 0.79 0.78 1.0 0.46 RNA-binding domain, RBD compare
1M5O_C_B 1URN_A_P 0.96 0.93 0.59 0.93 RNA-binding domain, RBD compare
1M5O_C_B 3MXH_P_R 0.94 0.68 1.06 0.81 RNA-binding domain, RBD compare
2NZ4_A_P 3MXH_P_R 0.94 0.6 0.92 0.81 RNA-binding domain, RBD compare
1SJ3_P_R 3MXH_P_R 0.95 0.64 1.0 0.78 RNA-binding domain, RBD compare
1SJ3_P_R 1URN_A_P 0.98 0.94 0.52 0.91 RNA-binding domain, RBD compare