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All interfaces > All interologs > Interface groups > group57 > 1VQ8_W_9 vs 1YHQ_W_9

Interface analysis


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Common contacts -

1VQ8_W
1VQ8_9
1YHQ_W
1YHQ_9
Conserved?
W:130 [HIS] 9:3086 [G] W:130 [HIS] 9:86 [G] ✔
W:130 [HIS] 9:3088 [G] W:130 [HIS] 9:88 [G] ✔
W:46 [ALA] 9:3099 [U] W:46 [ALA] 9:99 [U] ✔
W:46 [ALA] 9:3100 [G] W:46 [ALA] 9:100 [G] ✔
W:129 [LYS] 9:3086 [G] W:129 [LYS] 9:86 [G] ✔
W:129 [LYS] 9:3087 [U] W:129 [LYS] 9:87 [U] ✔
W:129 [LYS] 9:3088 [G] W:129 [LYS] 9:88 [G] ✔
W:51 [PHE] 9:3084 [G] W:51 [PHE] 9:84 [G] ✔
W:51 [PHE] 9:3085 [A] W:51 [PHE] 9:85 [A] ✔
W:50 [ASP] 9:3084 [G] W:50 [ASP] 9:84 [G] ✔
W:50 [ASP] 9:3085 [A] W:50 [ASP] 9:85 [A] ✔
W:50 [ASP] 9:3098 [C] W:50 [ASP] 9:98 [C] ✔
W:134 [GLU] 9:3097 [U] W:134 [GLU] 9:97 [U] ✔
W:134 [GLU] 9:3098 [C] W:134 [GLU] 9:98 [C] ✔
W:8 [ARG] 9:3085 [A] W:8 [ARG] 9:85 [A] ✔
W:8 [ARG] 9:3086 [G] W:8 [ARG] 9:86 [G] ✔
W:133 [LYS] 9:3098 [C] W:133 [LYS] 9:98 [C] ✔
W:133 [LYS] 9:3099 [U] W:133 [LYS] 9:99 [U] ✔
W:17 [ILE] 9:3084 [G] W:17 [ILE] 9:84 [G] ✔
W:131 [PRO] 9:3098 [C] W:131 [PRO] 9:98 [C] ✔
W:47 [LYS] 9:3084 [G] W:47 [LYS] 9:84 [G] ✔
W:138 [LEU] 9:3085 [A] W:138 [LEU] 9:85 [A] ✔
W:49 [ASN] 9:3099 [U] W:49 [ASN] 9:99 [U] ✔
W:128 [VAL] 9:3086 [G] W:128 [VAL] 9:86 [G] ✔
W:14 [HIS] 9:3084 [G] W:14 [HIS] 9:84 [G] ✔
W:14 [HIS] 9:3085 [A] W:14 [HIS] 9:85 [A] ✔
W:130 [HIS] 9:3087 [U] W:130 [HIS] 9:87 [U] ❌ 1YHQ_W_9
W:49 [ASN] 9:3084 [G] W:49 [ASN] 9:84 [G] ❌ 1VQ8_W_9
W:46 [ALA] 9:3083 [G] W:46 [ALA] 9:83 [G] ❌ 1YHQ_9:83 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L30p/L7e 5S ribosomal RNA 1.0 0.11 1.00 1.0 1.0 1.0 1.0 0.99 0.99 0.88 0.33


Other pairs involving 1VQ8_W_9 or 1YHQ_W_9

Total number of entries: 5

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1YHQ_W_9 7O7Y_BF_B7 0.74 0.85 1.14 0.18 Ribosomal protein L30p/L7e 5S ribosomal RNA compare
1YHQ_W_9 6AZ3_c_8 0.72 0.85 1.04 0.09 Ribosomal protein L30p/L7e 5S ribosomal RNA compare
1VQ8_W_9 1YHQ_W_9 0.99 1.0 0.11 1.0 Ribosomal protein L30p/L7e 5S ribosomal RNA compare
1VQ8_W_9 6AZ3_c_8 0.72 0.85 1.01 0.09 Ribosomal protein L30p/L7e 5S ribosomal RNA compare
1VQ8_W_9 7O7Y_BF_B7 0.74 0.85 1.15 0.18 Ribosomal protein L30p/L7e 5S ribosomal RNA compare