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All interfaces > All interologs > Interface groups > group57 > 1YHQ_W_9 vs 7O7Y_BF_B7

Interface analysis


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Common contacts -

1YHQ_W
1YHQ_9
7O7Y_BF
7O7Y_B7
Conserved?
W:130 [HIS] 9:86 [G] BF:224 [THR] B7:83 [A] ✔
W:130 [HIS] 9:88 [G] BF:224 [THR] B7:85 [G] ✔
W:46 [ALA] 9:99 [U] BF:133 [ARG] B7:96 [U] ✔
W:46 [ALA] 9:100 [G] BF:133 [ARG] B7:97 [G] ✔
W:129 [LYS] 9:86 [G] BF:223 [THR] B7:83 [A] ✔
W:129 [LYS] 9:87 [U] BF:223 [THR] B7:84 [U] ✔
W:129 [LYS] 9:88 [G] BF:223 [THR] B7:85 [G] ✔
W:50 [ASP] 9:84 [G] BF:137 [PRO] B7:81 [G] ✔
W:50 [ASP] 9:85 [A] BF:137 [PRO] B7:82 [G] ✔
W:134 [GLU] 9:97 [U] BF:228 [GLU] B7:94 [C] ✔
W:134 [GLU] 9:98 [C] BF:228 [GLU] B7:95 [C] ✔
W:8 [ARG] 9:85 [A] BF:95 [ARG] B7:82 [G] ✔
W:8 [ARG] 9:86 [G] BF:95 [ARG] B7:83 [A] ✔
W:133 [LYS] 9:98 [C] BF:227 [VAL] B7:95 [C] ✔
W:133 [LYS] 9:99 [U] BF:227 [VAL] B7:96 [U] ✔
W:131 [PRO] 9:98 [C] BF:225 [HIS] B7:95 [C] ✔
W:47 [LYS] 9:84 [G] BF:134 [ILE] B7:81 [G] ✔
W:49 [ASN] 9:99 [U] BF:136 [GLU] B7:96 [U] ✔
W:50 [ASP] 9:98 [C] BF:137 [PRO] B7:95 [C] ❌ 7O7Y_BF_B7
W:49 [ASN] 9:84 [G] BF:136 [GLU] B7:81 [G] ❌ 7O7Y_BF_B7
W:129 [LYS] 9:85 [A] BF:223 [THR] B7:82 [G] ❌ 1YHQ_W_9
W:130 [HIS] 9:85 [A] BF:224 [THR] B7:82 [G] ❌ 1YHQ_W_9
W:131 [PRO] 9:99 [U] BF:225 [HIS] B7:96 [U] ❌ 1YHQ_W_9
W:134 [GLU] 9:86 [G] BF:228 [GLU] B7:83 [A] ❌ 1YHQ_W_9
W:134 [GLU] 9:85 [A] BF:228 [GLU] B7:82 [G] ❌ 1YHQ_W_9
W:51 [PHE] 9:84 [G] BF:138 [TYR] B7:81 [G] ❌ 7O7Y_BF:138 no longer at interface
W:51 [PHE] 9:85 [A] BF:138 [TYR] B7:82 [G] ❌ 7O7Y_BF:138 no longer at interface
W:17 [ILE] 9:84 [G] BF:104 [VAL] B7:81 [G] ❌ 7O7Y_BF:104 no longer at interface
W:138 [LEU] 9:85 [A] BF:232 [ALA] B7:82 [G] ❌ 7O7Y_BF:232 no longer at interface
W:128 [VAL] 9:86 [G] BF:222 [LYS] B7:83 [A] ❌ 7O7Y_BF:222 no longer at interface
W:14 [HIS] 9:84 [G] BF:101 [SER] B7:81 [G] ❌ 7O7Y_BF:101 no longer at interface
W:14 [HIS] 9:85 [A] BF:101 [SER] B7:82 [G] ❌ 7O7Y_BF:101 no longer at interface
W:127 [GLY] 9:88 [G] BF:221 [LYS] B7:85 [G] ❌ 1YHQ_W:127 no longer at interface
W:127 [GLY] 9:86 [G] BF:221 [LYS] B7:83 [A] ❌ 1YHQ_W:127 no longer at interface
W:127 [GLY] 9:87 [U] BF:221 [LYS] B7:84 [U] ❌ 1YHQ_W:127 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L30p/L7e 5S ribosomal RNA 0.85 1.14 0.18 0.86 0.83 0.91 1.0 0.74 0.52 0.00 0.59


Other pairs involving 1YHQ_W_9 or 7O7Y_BF_B7

Total number of entries: 5

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_W_9 1YHQ_W_9 0.99 1.0 0.11 1.0 Ribosomal protein L30p/L7e 5S ribosomal RNA compare
1YHQ_W_9 6AZ3_c_8 0.72 0.85 1.04 0.09 Ribosomal protein L30p/L7e 5S ribosomal RNA compare
6AZ3_c_8 7O7Y_BF_B7 0.90 0.95 0.44 0.44 Ribosomal protein L30p/L7e 5S ribosomal RNA compare
1YHQ_W_9 7O7Y_BF_B7 0.74 0.85 1.14 0.18 Ribosomal protein L30p/L7e 5S ribosomal RNA compare
1VQ8_W_9 7O7Y_BF_B7 0.74 0.85 1.15 0.18 Ribosomal protein L30p/L7e 5S ribosomal RNA compare