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All interfaces > All interologs > Interface groups > group72 > 7O7Y_BT_B5

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Licorice
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Rim - Core

Contacts -

7O7Y_BT
7O7Y_B5
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
BT:2 [THR] B5:3965 [A] 3.82 B5:3958 [A] 57.16
BT:2 [THR] B5:3966 [6MZ] 2.63 57.16
BT:3 [ASN] B5:3956 [U] 3.83 B5:3968 [G] 73.1
BT:3 [ASN] B5:3957 [C] 3.15 base:SC 73.1
BT:3 [ASN] B5:3958 [A] 2.61 B5:3965 [A] base:SC 73.1
BT:3 [ASN] B5:3964 [U] 3.24 B5:3959 [A] 73.1
BT:3 [ASN] B5:3965 [A] 3.44 B5:3958 [A] 73.1
BT:4 [THR] B5:3953 [C] 3.36 B5:3971 [G] 92.68
BT:4 [THR] B5:3954 [U] 2.5 B5:3970 [A] 92.68
BT:5 [LYS] B5:3953 [C] 2.81 B5:3971 [G] 34.78
BT:5 [LYS] B5:3954 [U] 4.91 B5:3970 [A] 34.78
BT:5 [LYS] B5:3964 [U] 4.59 B5:3959 [A] 34.78
BT:5 [LYS] B5:4047 [U] 4.39 B5:4055 [G] 34.78
BT:5 [LYS] B5:4048 [U] 3.29 B5:4053 [A] 34.78
BT:5 [LYS] B5:4049 [C] 3.95 34.78
BT:6 [GLY] B5:3953 [C] 3.1 B5:3971 [G] 97.54
BT:6 [GLY] B5:3954 [U] 3.33 B5:3970 [A] 97.54
BT:6 [GLY] B5:4080 [U] 4.15 B5:4020 [A] 97.54
BT:6 [GLY] B5:4081 [C] 4.59 97.54
BT:7 [LYS] B5:3953 [C] 5.0 B5:3971 [G] 12.62
BT:7 [LYS] B5:3954 [U] 4.08 B5:3970 [A] 12.62
BT:7 [LYS] B5:4046 [U] 4.99 B5:4056 [A] 12.62
BT:7 [LYS] B5:4047 [U] 3.53 B5:4055 [G] 12.62
BT:7 [LYS] B5:4055 [G] 4.32 B5:4047 [U] 12.62
BT:7 [LYS] B5:4056 [A] 2.79 B5:4046 [U] base:SC 12.62
BT:7 [LYS] B5:4057 [A] 3.09 B5:4045 [PSU] sugar:SC 12.62
BT:7 [LYS] B5:4080 [U] 3.59 B5:4020 [A] 12.62
BT:7 [LYS] B5:4081 [C] 3.7 12.62
BT:8 [ARG] B5:3954 [U] 3.74 B5:3970 [A] 93.37
BT:8 [ARG] B5:3955 [G] 3.59 B5:3969 [C] 93.37
BT:8 [ARG] B5:4021 [G] 3.92 B5:4079 [C] 93.37
BT:8 [ARG] B5:4022 [G] 3.33 B5:4078 [C] sugar:SC 93.37
BT:8 [ARG] B5:4079 [C] 3.2 B5:4021 [G] sugar:SC 93.37
BT:8 [ARG] B5:4080 [U] 3.29 B5:4020 [A] sugar:BB 93.37
BT:9 [ARG] B5:3954 [U] 3.28 B5:3970 [A] 59.34
BT:9 [ARG] B5:3955 [G] 3.46 B5:3969 [C] 59.34
BT:9 [ARG] B5:3957 [C] 4.41 59.34
BT:9 [ARG] B5:3958 [A] 4.55 B5:3965 [A] 59.34
BT:9 [ARG] B5:3963 [G] 3.57 59.34
BT:9 [ARG] B5:3964 [U] 2.82 B5:3959 [A] 59.34
BT:9 [ARG] B5:4080 [U] 4.31 B5:4020 [A] 59.34
BT:10 [GLY] B5:1673 [G] 4.76 64.27
BT:10 [GLY] B5:3955 [G] 3.5 B5:3969 [C] 64.27
BT:10 [GLY] B5:3956 [U] 4.26 B5:3968 [G] 64.27
BT:10 [GLY] B5:3962 [G] 4.74 64.27
BT:11 [THR] B5:3955 [G] 4.1 B5:3969 [C] 97.15
BT:12 [ARG] B5:1727 [A] 3.45 99.0
BT:12 [ARG] B5:1728 [C] 3.01 B5:1678 [G] 99.0
BT:12 [ARG] B5:1729 [U] 3.55 B5:1677 [A] 99.0
BT:12 [ARG] B5:3955 [G] 3.23 B5:3969 [C] sugar:SC 99.0
BT:12 [ARG] B5:3956 [U] 3.73 B5:3968 [G] 99.0
BT:12 [ARG] B5:4021 [G] 3.19 B5:4079 [C] 99.0
BT:12 [ARG] B5:4022 [G] 3.52 B5:4078 [C] 99.0
BT:13 [TYR] B5:1673 [G] 3.53 47.34
BT:13 [TYR] B5:1674 [U] 3.93 B5:1733 [A] 47.34
BT:13 [TYR] B5:1728 [C] 4.77 B5:1678 [G] 47.34
BT:13 [TYR] B5:1729 [U] 2.7 B5:1677 [A] 47.34
BT:13 [TYR] B5:3956 [U] 3.58 B5:3968 [G] 47.34
BT:14 [MET] B5:1672 [G] 4.33 B5:1735 [U] 48.02
BT:14 [MET] B5:1673 [G] 3.37 48.02
BT:14 [MET] B5:3961 [C] 4.17 48.02
BT:14 [MET] B5:3962 [G] 3.2 48.02
BT:15 [PHE] B5:4022 [G] 3.68 B5:4078 [C] 81.87
BT:15 [PHE] B5:4023 [G] 4.34 B5:4016 [C] 81.87
BT:16 [SER] B5:4022 [G] 3.31 B5:4078 [C] 71.96
BT:16 [SER] B5:4023 [G] 3.32 B5:4016 [C] 71.96
BT:17 [ARG] B5:4022 [G] 4.28 B5:4078 [C] 80.42
BT:17 [ARG] B5:4023 [G] 2.63 B5:4016 [C] 80.42
BT:17 [ARG] B5:4024 [C] 3.68 B5:4015 [G] 80.42
BT:19 [PHE] B5:1730 [U] 3.6 59.13
BT:19 [PHE] B5:1731 [PSU] 4.28 B5:1676 [A] 59.13
BT:22 [HIS] B5:4023 [G] 3.26 B5:4016 [C] 68.78
BT:22 [HIS] B5:4024 [C] 2.79 B5:4015 [G] 68.78
BT:23 [GLY] B5:4024 [C] 2.9 B5:4015 [G] 91.47
BT:23 [GLY] B5:4025 [A] 3.21 91.47
BT:24 [VAL] B5:4025 [A] 3.93 3.21
BT:24 [VAL] B5:4026 [A] 4.97 3.21
BT:35 [LYS] B5:1763 [G] 3.33 B5:1753 [C] 64.38
BT:35 [LYS] B5:1764 [A] 3.98 B5:1752 [U] 64.38
BT:36 [LYS] B5:1764 [A] 4.36 B5:1752 [U] 44.26
BT:36 [LYS] B5:1765 [G] 3.41 B5:1751 [C] 44.26
BT:39 [ILE] B5:1739 [U] 3.75 B5:1668 [A] 47.7
BT:41 [ASP] B5:1669 [U] 4.76 B5:1738 [G] 78.66
BT:41 [ASP] B5:1670 [C] 3.46 B5:1737 [G] 78.66
BT:41 [ASP] B5:1738 [G] 4.26 B5:1669 [U] 78.66
BT:42 [ILE] B5:1671 [C] 4.96 B5:1736 [G] 89.77
BT:43 [LYS] B5:1671 [C] 2.98 B5:1736 [G] 46.94
BT:43 [LYS] B5:1672 [G] 3.69 B5:1735 [U] 46.94
BT:46 [GLY] B5:4022 [G] 4.67 B5:4078 [C] 69.21
BT:46 [GLY] B5:4023 [G] 3.32 B5:4016 [C] 69.21
BT:47 [THR] B5:4023 [G] 3.39 B5:4016 [C] sugar:BB 77.91
BT:47 [THR] B5:4024 [C] 3.12 B5:4015 [G] 77.91
BT:47 [THR] B5:4028 [A] 2.92 base:BB 77.91
BT:49 [GLN] B5:4022 [G] 3.77 B5:4078 [C] 78.57
BT:49 [GLN] B5:4023 [G] 3.16 B5:4016 [C] sugar:SC 78.57
BT:49 [GLN] B5:4028 [A] 3.35 base:SC 78.57
BT:49 [GLN] B5:4078 [C] 3.03 B5:4022 [G] sugar:SC 78.57
BT:49 [GLN] B5:4079 [C] 3.18 B5:4021 [G] 78.57
BT:50 [LYS] B5:4058 [PSU] 4.25 B5:4044 [A] 88.87
BT:50 [LYS] B5:4059 [A] 3.65 88.87
BT:50 [LYS] B5:4074 [G] 3.5 B5:4065 [C] 88.87
BT:50 [LYS] B5:4075 [G] 4.78 88.87
BT:51 [GLY] B5:4058 [PSU] 3.15 B5:4044 [A] 89.26
BT:51 [GLY] B5:4059 [A] 3.8 89.26
BT:52 [MET] B5:4079 [C] 4.69 B5:4021 [G] 85.3
BT:54 [HIS] B5:4046 [U] 4.13 B5:4056 [A] 84.2
BT:54 [HIS] B5:4047 [U] 3.47 B5:4055 [G] 84.2
BT:54 [HIS] B5:4048 [U] 3.9 B5:4053 [A] 84.2
BT:55 [LYS] B5:3961 [C] 4.77 74.33
BT:55 [LYS] B5:3962 [G] 4.01 74.33
BT:55 [LYS] B5:3963 [G] 2.98 74.33
BT:56 [CYS] B5:3962 [G] 4.14 55.96
BT:56 [CYS] B5:4047 [U] 4.16 B5:4055 [G] 55.96
BT:57 [TYR] B5:4046 [U] 3.31 B5:4056 [A] 72.06
BT:57 [TYR] B5:4047 [U] 2.66 B5:4055 [G] 72.06
BT:58 [HIS] B5:1671 [C] 3.0 B5:1736 [G] 86.79
BT:58 [HIS] B5:1672 [G] 3.13 B5:1735 [U] 86.79
BT:58 [HIS] B5:3961 [C] 3.72 sugar:BB 86.79
BT:59 [GLY] B5:1670 [C] 4.2 B5:1737 [G] 95.43
BT:59 [GLY] B5:1671 [C] 3.28 B5:1736 [G] 95.43
BT:59 [GLY] B5:1737 [G] 2.92 B5:1670 [C] base:BB 95.43
BT:59 [GLY] B5:1738 [G] 4.05 B5:1669 [U] 95.43
BT:60 [LYS] B5:1737 [G] 2.32 B5:1670 [C] sugar:SC 66.51
BT:60 [LYS] B5:1738 [G] 3.66 B5:1669 [U] 66.51
BT:60 [LYS] B5:3961 [C] 2.9 base:SC 66.51
BT:61 [THR] B5:1738 [G] 2.99 B5:1669 [U] base:SC, sugar:BB 91.29
BT:61 [THR] B5:1739 [U] 3.4 B5:1668 [A] 91.29
BT:68 [THR] B5:4059 [A] 3.06 sugar:SC 78.11
BT:68 [THR] B5:4060 [C] 3.38 B5:4043 [G] 78.11
BT:69 [GLN] B5:4060 [C] 3.34 B5:4043 [G] 75.32
BT:69 [GLN] B5:4061 [A] 2.68 B5:4041 [U] 75.32
BT:70 [HIS] B5:4059 [A] 4.53 73.51
BT:70 [HIS] B5:4060 [C] 2.72 B5:4043 [G] 73.51
BT:70 [HIS] B5:4072 [G] 4.69 B5:4067 [U] 73.51
BT:70 [HIS] B5:4073 [C] 2.44 B5:4066 [G] 73.51
BT:71 [ALA] B5:4059 [A] 3.58 84.63
BT:71 [ALA] B5:4060 [C] 4.02 B5:4043 [G] 84.63
BT:77 [ASN] B5:1738 [G] 4.76 B5:1669 [U] 70.09
BT:77 [ASN] B5:1739 [U] 2.71 B5:1668 [A] 70.09
BT:78 [LYS] B5:4047 [U] 2.61 B5:4055 [G] 80.72
BT:78 [LYS] B5:4048 [U] 3.61 B5:4053 [A] 80.72
BT:78 [LYS] B5:4049 [C] 3.88 80.72
BT:78 [LYS] B5:4051 [G] 3.1 base:SC 80.72
BT:79 [GLN] B5:1738 [G] 4.13 B5:1669 [U] 42.43
BT:80 [VAL] B5:4050 [A] 4.44 74.44
BT:80 [VAL] B5:4051 [G] 3.25 74.44
BT:81 [LYS] B5:1627 [U] 3.78 B5:1638 [PSU] 64.19
BT:81 [LYS] B5:4049 [C] 4.9 64.19
BT:81 [LYS] B5:4050 [A] 3.05 64.19
BT:81 [LYS] B5:4051 [G] 4.41 64.19
BT:83 [LYS] B5:4050 [A] 4.72 74.7
BT:83 [LYS] B5:4051 [G] 2.5 74.7
BT:85 [LEU] B5:4051 [G] 3.36 53.54
BT:87 [LYS] B5:4046 [U] 3.18 B5:4056 [A] 91.75
BT:87 [LYS] B5:4047 [U] 2.85 B5:4055 [G] 91.75
BT:87 [LYS] B5:4049 [C] 4.33 91.75
BT:87 [LYS] B5:4051 [G] 2.81 base:SC 91.75
BT:88 [ARG] B5:4045 [PSU] 2.69 B5:4057 [A] sugar:BB 64.83
BT:88 [ARG] B5:4046 [U] 3.34 B5:4056 [A] 64.83
BT:89 [ILE] B5:4045 [PSU] 3.89 B5:4057 [A] 76.66
BT:89 [ILE] B5:4046 [U] 3.87 B5:4056 [A] 76.66
BT:90 [ASN] B5:4044 [A] 4.06 B5:4058 [PSU] 77.01
BT:90 [ASN] B5:4045 [PSU] 4.17 B5:4057 [A] 77.01
BT:90 [ASN] B5:4058 [PSU] 3.29 B5:4044 [A] 77.01
BT:90 [ASN] B5:4059 [A] 3.49 77.01
BT:92 [ARG] B5:4058 [PSU] 4.6 B5:4044 [A] 82.41
BT:92 [ARG] B5:4059 [A] 2.58 82.41
BT:92 [ARG] B5:4060 [C] 4.91 B5:4043 [G] 82.41
BT:92 [ARG] B5:4074 [G] 4.8 B5:4065 [C] 82.41
BT:97 [LYS] B5:1670 [C] 3.15 B5:1737 [G] 57.83
BT:97 [LYS] B5:1671 [C] 3.66 B5:1736 [G] 57.83
BT:99 [SER] B5:1669 [U] 4.44 B5:1738 [G] 86.87
BT:99 [SER] B5:1738 [G] 4.89 B5:1669 [U] 86.87
BT:99 [SER] B5:1739 [U] 4.95 B5:1668 [A] 86.87
BT:100 [LYS] B5:1668 [A] 4.35 B5:1739 [U] 46.03
BT:100 [LYS] B5:1669 [U] 3.5 B5:1738 [G] sugar:BB 46.03
BT:100 [LYS] B5:1670 [C] 3.51 B5:1737 [G] 46.03
BT:101 [SER] B5:1668 [A] 4.35 B5:1739 [U] 66.59
BT:101 [SER] B5:1669 [U] 3.58 B5:1738 [G] 66.59
BT:101 [SER] B5:1738 [G] 4.97 B5:1669 [U] 66.59
BT:101 [SER] B5:1739 [U] 3.18 B5:1668 [A] sugar:SC 66.59
BT:101 [SER] B5:1740 [A] 3.8 B5:1667 [U] 66.59
BT:102 [ARG] B5:1740 [A] 2.71 B5:1667 [U] 43.74
BT:102 [ARG] B5:1741 [A] 3.02 B5:1666 [U] 43.74
BT:102 [ARG] B5:1745 [G] 4.81 B5:1771 [C] 43.74
BT:102 [ARG] B5:1746 [C] 4.78 B5:1770 [G] 43.74
BT:104 [SER] B5:1668 [A] 3.31 B5:1739 [U] 52.52
BT:105 [PHE] B5:1740 [A] 3.85 B5:1667 [U] 60.03
BT:105 [PHE] B5:1741 [A] 3.48 B5:1666 [U] 60.03
BT:105 [PHE] B5:1742 [G] 3.13 60.03
BT:105 [PHE] B5:1745 [G] 4.75 B5:1771 [C] 60.03
BT:105 [PHE] B5:1775 [G] 4.71 B5:1743 [A] 60.03
BT:108 [ARG] B5:1741 [A] 2.59 B5:1666 [U] sugar:SC 84.3
BT:108 [ARG] B5:1742 [G] 4.91 84.3
BT:108 [ARG] B5:1775 [G] 2.61 B5:1743 [A] sugar:SC 84.3
BT:108 [ARG] B5:1776 [A] 2.69 B5:1665 [U] 84.3
BT:109 [VAL] B5:1742 [G] 3.75 49.21
BT:109 [VAL] B5:1746 [C] 4.59 B5:1770 [G] 49.21
BT:112 [ASN] B5:1742 [G] 3.67 base:SC 73.8
BT:112 [ASN] B5:1775 [G] 3.88 B5:1743 [A] sugar:SC 73.8
BT:113 [ASP] B5:1742 [G] 4.05 36.97
BT:113 [ASP] B5:1746 [C] 3.49 B5:1770 [G] sugar:SC 36.97
BT:115 [LYS] B5:1773 [U] 4.83 0.0
BT:116 [LYS] B5:1773 [U] 4.44 48.51
BT:116 [LYS] B5:1775 [G] 3.58 B5:1743 [A] base:SC 48.51
BT:119 [ALA] B5:1773 [U] 4.08 75.29
BT:120 [LYS] B5:1771 [C] 3.42 B5:1745 [G] 54.94
BT:120 [LYS] B5:1772 [G] 2.49 54.94
BT:120 [LYS] B5:1773 [U] 4.96 54.94
BT:124 [THR] B5:1773 [U] 3.74 1.39
BT:125 [TRP] B5:1773 [U] 3.27 base/AA stacks 1.08
BT:126 [VAL] B5:1773 [U] 2.91 base:BB, base:BB 44.27
BT:127 [GLN] B5:1773 [U] 4.85 30.51
BT:128 [LEU] B5:1773 [U] 3.72 35.69
BT:128 [LEU] B5:1775 [G] 4.32 B5:1743 [A] 35.69
BT:128 [LEU] B5:1776 [A] 4.79 B5:1665 [U] 35.69
BT:129 [LYS] B5:1773 [U] 4.54 80.77
BT:129 [LYS] B5:1774 [G] 3.3 80.77
BT:129 [LYS] B5:1775 [G] 2.94 B5:1743 [A] 80.77
BT:129 [LYS] B5:1776 [A] 3.75 B5:1665 [U] 80.77
BT:130 [ARG] B5:1667 [U] 3.24 B5:1740 [A] base:SC 83.45
BT:130 [ARG] B5:1741 [A] 2.98 B5:1666 [U] base:SC 83.45
BT:130 [ARG] B5:1775 [G] 4.48 B5:1743 [A] 83.45
BT:130 [ARG] B5:1776 [A] 2.78 B5:1665 [U] sugar:BB 83.45
BT:131 [GLN] B5:1776 [A] 3.59 B5:1665 [U] 47.18
BT:131 [GLN] B5:1777 [A] 4.18 B5:1664 [U] 47.18
BT:132 [PRO] B5:1666 [U] 4.38 B5:1741 [A] 66.33
BT:132 [PRO] B5:1776 [A] 3.28 B5:1665 [U] 66.33
BT:132 [PRO] B5:1777 [A] 3.99 B5:1664 [U] 66.33
BT:140 [PHE] B5:1003 [C] 3.67 B5:1099 [G] 14.39
BT:140 [PHE] B5:1004 [G] 3.54 B5:1098 [C] 14.39
BT:140 [PHE] B5:1090 [U] 3.09 14.39
BT:141 [VAL] B5:1090 [U] 3.63 66.3
BT:142 [ARG] B5:1005 [G] 2.81 B5:1097 [C] 51.58
BT:142 [ARG] B5:1006 [C] 3.64 B5:1096 [G] 51.58
BT:142 [ARG] B5:1090 [U] 3.17 base:BB 51.58

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group72 7O7Y_BT_B5 BT: El21, Oryctolagus cuniculus (natural) B5: 28s rRNA, Oryctolagus cuniculus (natural) G1SHQ2 SH3 Eukaryotic large subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 4

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_Q_0 7O7Y_BT_B5 0.67 0.94 1.91 0.22 SH3 compare
1YHQ_Q_0 7O7Y_BT_B5 0.67 0.94 1.87 0.23 SH3 compare
6AZ3_S_1 7O7Y_BT_B5 0.69 0.92 1.39 0.26 SH3 Eukaryotic large subunit ribosomal RNA compare
6AZ3_S_2 7O7Y_BT_B5 0.79 0.91 1.52 0.42 SH3 Eukaryotic large subunit ribosomal RNA compare