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All interfaces > All interologs > Interface groups > group72 > 1VQ8_Q_0 vs 6AZ3_S_2

Interface analysis


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Common contacts -

1VQ8_Q
1VQ8_0
6AZ3_S
6AZ3_2
Conserved?
Q:82 [LYS] 0:2388 [C] S:87 [LYS] 2:1152 [U] ✔
Q:82 [LYS] 0:2389 [U] S:87 [LYS] 2:1153 [OMU] ✔
Q:9 [GLY] 0:2296 [C] S:10 [GLY] 2:1059 [U] ✔
Q:9 [GLY] 0:2297 [U] S:10 [GLY] 2:1060 [G] ✔
Q:9 [GLY] 0:2298 [C] S:10 [GLY] 2:1061 [U] ✔
Q:10 [THR] 0:2297 [U] S:11 [THR] 2:1060 [G] ✔
Q:8 [GLU] 0:2296 [C] S:9 [SER] 2:1059 [U] ✔
Q:8 [GLU] 0:2297 [U] S:9 [SER] 2:1060 [G] ✔
Q:14 [LEU] 0:2364 [A] S:15 [PHE] 2:1127 [C] ✔
Q:14 [LEU] 0:2365 [G] S:15 [PHE] 2:1128 [G] ✔
Q:83 [THR] 0:2387 [U] S:88 [ARG] 2:1151 [U] ✔
Q:83 [THR] 0:2388 [C] S:88 [ARG] 2:1152 [U] ✔
Q:69 [ASP] 0:2403 [C] S:70 [ARG] 2:1165 [C] ✔
Q:69 [ASP] 0:2404 [G] S:70 [ARG] 2:1166 [G] ✔
Q:51 [ARG] 0:2402 [A] S:52 [MET] 2:1164 [U] ✔
Q:55 [ARG] 0:2304 [G] S:56 [TYR] 2:1067 [G] ✔
Q:85 [ILE] 0:2386 [U] S:90 [CYS] 2:1150 [A] ✔
Q:85 [ILE] 0:2387 [U] S:90 [CYS] 2:1151 [U] ✔
Q:85 [ILE] 0:2402 [A] S:90 [CYS] 2:1164 [U] ✔
Q:85 [ILE] 0:2403 [C] S:90 [CYS] 2:1165 [C] ✔
Q:45 [PRO] 0:2365 [G] S:46 [SER] 2:1128 [G] ✔
Q:2 [SER] 0:2295 [G] S:3 [HIS] 2:1058 [C] ✔
Q:2 [SER] 0:2296 [C] S:3 [HIS] 2:1059 [U] ✔
Q:2 [SER] 0:2297 [U] S:3 [HIS] 2:1060 [G] ✔
Q:2 [SER] 0:2298 [C] S:3 [HIS] 2:1061 [U] ✔
Q:2 [SER] 0:2299 [G] S:3 [HIS] 2:1062 [U] ✔
Q:2 [SER] 0:2310 [G] S:3 [HIS] 2:1073 [G] ✔
Q:2 [SER] 0:2311 [A] S:3 [HIS] 2:1074 [C] ✔
Q:1 [PRO] 0:2298 [C] S:2 [VAL] 2:1061 [U] ✔
Q:1 [PRO] 0:2299 [G] S:2 [VAL] 2:1062 [U] ✔
Q:1 [PRO] 0:2300 [A] S:2 [VAL] 2:1063 [A] ✔
Q:1 [PRO] 0:2306 [U] S:2 [VAL] 2:1069 [C] ✔
Q:1 [PRO] 0:2307 [A] S:2 [VAL] 2:1070 [A] ✔
Q:48 [PRO] 0:2365 [G] S:49 [ARG] 2:1128 [G] ✔
Q:48 [PRO] 0:2370 [A] S:49 [ARG] 2:1133 [A] ✔
Q:77 [ASP] 0:2389 [U] S:78 [LYS] 2:1153 [OMU] ✔
Q:3 [SER] 0:2295 [G] S:4 [SER] 2:1058 [C] ✔
Q:3 [SER] 0:2296 [C] S:4 [SER] 2:1059 [U] ✔
Q:15 [LYS] 0:2364 [A] S:16 [ALA] 2:1127 [C] ✔
Q:15 [LYS] 0:2365 [G] S:16 [ALA] 2:1128 [G] ✔
Q:84 [ILE] 0:2387 [U] S:89 [ILE] 2:1151 [U] ✔
Q:68 [GLY] 0:2404 [G] S:69 [PRO] 2:1166 [G] ✔
Q:68 [GLY] 0:2405 [C] S:69 [PRO] 2:1167 [A] ✔
Q:47 [VAL] 0:2370 [A] S:48 [VAL] 2:1133 [A] ✔
Q:23 [THR] 0:2366 [C] S:24 [ALA] 2:1129 [U] ✔
Q:6 [PRO] 0:2296 [C] S:7 [TYR] 2:1059 [U] ✔
Q:6 [PRO] 0:2389 [U] S:7 [TYR] 2:1153 [OMU] ✔
Q:6 [PRO] 0:2424 [U] S:7 [TYR] 2:1185 [C] ✔
Q:6 [PRO] 0:2425 [A] S:7 [TYR] 2:1186 [A2M] ✔
Q:11 [ARG] 0:2297 [U] S:12 [ARG] 2:1060 [G] ✔
Q:11 [ARG] 0:2298 [C] S:12 [ARG] 2:1061 [U] ✔
Q:11 [ARG] 0:2363 [G] S:12 [ARG] 2:1126 [G] ✔
Q:11 [ARG] 0:2364 [A] S:12 [ARG] 2:1127 [C] ✔
Q:4 [ASN] 0:2295 [G] S:5 [TYR] 2:1058 [C] ✔
Q:4 [ASN] 0:2296 [C] S:5 [TYR] 2:1059 [U] ✔
Q:4 [ASN] 0:2306 [U] S:5 [TYR] 2:1069 [C] ✔
Q:70 [ALA] 0:2403 [C] S:71 [GLY] 2:1165 [C] ✔
Q:70 [ALA] 0:2404 [G] S:71 [GLY] 2:1166 [G] ✔
Q:80 [LYS] 0:2395 [A] S:85 [LEU] 2:1157 [G] ✔
Q:50 [GLY] 0:2402 [A] S:51 [GLY] 2:1164 [U] ✔
Q:50 [GLY] 0:2403 [C] S:51 [GLY] 2:1165 [C] ✔
Q:46 [SER] 0:2365 [G] S:47 [ALA] 2:1128 [G] ✔
Q:46 [SER] 0:2366 [C] S:47 [ALA] 2:1129 [U] ✔
Q:46 [SER] 0:2370 [A] S:47 [ALA] 2:1133 [A] ✔
Q:49 [ASN] 0:2402 [A] S:50 [GLU] 2:1164 [U] ✔
Q:49 [ASN] 0:2403 [C] S:50 [GLU] 2:1165 [C] ✔
Q:49 [ASN] 0:2418 [G] S:50 [GLU] 2:1180 [A] ✔
Q:87 [THR] 0:2403 [C] S:92 [ARG] 2:1165 [C] ✔
Q:53 [HIS] 0:2388 [C] S:54 [HIS] 2:1152 [U] ✔
Q:53 [HIS] 0:2389 [U] S:54 [HIS] 2:1153 [OMU] ✔
Q:16 [ASN] 0:2364 [A] S:17 [LYS] 2:1127 [C] ✔
Q:16 [ASN] 0:2365 [G] S:17 [LYS] 2:1128 [G] ✔
Q:16 [ASN] 0:2366 [C] S:17 [LYS] 2:1129 [U] ✔
Q:56 [PHE] 0:2388 [C] S:57 [TYR] 2:1152 [U] ✔
Q:56 [PHE] 0:2389 [U] S:57 [TYR] 2:1153 [OMU] ✔
Q:13 [LYS] 0:2304 [G] S:14 [LEU] 2:1067 [G] ✔
Q:21 [ARG] 0:2366 [C] S:22 [HIS] 2:1129 [U] ✔
Q:5 [GLY] 0:2295 [G] S:6 [GLY] 2:1058 [C] ✔
Q:5 [GLY] 0:2296 [C] S:6 [GLY] 2:1059 [U] ✔
Q:7 [LEU] 0:2296 [C] S:8 [LYS] 2:1059 [U] ✔
Q:7 [LEU] 0:2297 [U] S:8 [LYS] 2:1060 [G] ✔
Q:7 [LEU] 0:2363 [G] S:8 [LYS] 2:1126 [G] ✔
Q:7 [LEU] 0:2423 [C] S:8 [LYS] 2:1184 [C] ✔
Q:7 [LEU] 0:2424 [U] S:8 [LYS] 2:1185 [C] ✔
Q:22 [GLY] 0:2366 [C] S:23 [GLY] 2:1129 [U] ✔
Q:22 [GLY] 0:2367 [A] S:23 [GLY] 2:1130 [A] ✔
Q:67 [GLN] 0:2403 [C] S:68 [THR] 2:1165 [C] ✔
Q:67 [GLN] 0:2404 [G] S:68 [THR] 2:1166 [G] ✔
Q:82 [LYS] 0:2387 [U] S:87 [LYS] 2:1151 [U] ❌ 6AZ3_S_2
Q:8 [GLU] 0:2305 [A] S:9 [SER] 2:1068 [A2M] ❌ 6AZ3_S_2
Q:8 [GLU] 0:2306 [U] S:9 [SER] 2:1069 [C] ❌ 6AZ3_S_2
Q:55 [ARG] 0:2305 [A] S:56 [TYR] 2:1068 [A2M] ❌ 6AZ3_S_2
Q:55 [ARG] 0:2389 [U] S:56 [TYR] 2:1153 [OMU] ❌ 6AZ3_S_2
Q:55 [ARG] 0:2390 [U] S:56 [TYR] 2:1154 [C] ❌ 6AZ3_S_2
Q:3 [SER] 0:2297 [U] S:4 [SER] 2:1060 [G] ❌ 6AZ3_S_2
Q:68 [GLY] 0:2403 [C] S:69 [PRO] 2:1165 [C] ❌ 6AZ3_S_2
Q:23 [THR] 0:2367 [A] S:24 [ALA] 2:1130 [A] ❌ 6AZ3_S_2
Q:4 [ASN] 0:2390 [U] S:5 [TYR] 2:1154 [C] ❌ 6AZ3_S_2
Q:4 [ASN] 0:2391 [C] S:5 [TYR] 2:1155 [C] ❌ 6AZ3_S_2
Q:80 [LYS] 0:2394 [A] S:85 [LEU] 2:1156 [A] ❌ 6AZ3_S_2
Q:13 [LYS] 0:2303 [A] S:14 [LEU] 2:1066 [C] ❌ 6AZ3_S_2
Q:5 [GLY] 0:2424 [U] S:6 [GLY] 2:1185 [C] ❌ 6AZ3_S_2
Q:67 [GLN] 0:2386 [U] S:68 [THR] 2:1150 [A] ❌ 6AZ3_S_2
Q:67 [GLN] 0:2402 [A] S:68 [THR] 2:1164 [U] ❌ 6AZ3_S_2
Q:9 [GLY] 0:2304 [G] S:10 [GLY] 2:1067 [G] ❌ 1VQ8_Q_0
Q:12 [GLY] 0:2298 [C] S:13 [HIS] 2:1061 [U] ❌ 1VQ8_Q_0
Q:1 [PRO] 0:2297 [U] S:2 [VAL] 2:1060 [G] ❌ 1VQ8_Q_0
Q:1 [PRO] 0:2296 [C] S:2 [VAL] 2:1059 [U] ❌ 1VQ8_Q_0
Q:21 [ARG] 0:2365 [G] S:22 [HIS] 2:1128 [G] ❌ 1VQ8_Q_0
Q:45 [PRO] 0:2364 [A] S:46 [SER] 2:1127 [C] ❌ 1VQ8_Q_0
Q:48 [PRO] 0:2364 [A] S:49 [ARG] 2:1127 [C] ❌ 1VQ8_Q_0
Q:48 [PRO] 0:2423 [C] S:49 [ARG] 2:1184 [C] ❌ 1VQ8_Q_0
Q:48 [PRO] 0:2363 [G] S:49 [ARG] 2:1126 [G] ❌ 1VQ8_Q_0
Q:4 [ASN] 0:2389 [U] S:5 [TYR] 2:1153 [OMU] ❌ 1VQ8_Q_0
Q:4 [ASN] 0:2307 [A] S:5 [TYR] 2:1070 [A] ❌ 1VQ8_Q_0
Q:53 [HIS] 0:2390 [U] S:54 [HIS] 2:1154 [C] ❌ 1VQ8_Q_0
Q:55 [ARG] 0:2303 [A] S:56 [TYR] 2:1066 [C] ❌ 1VQ8_Q_0
Q:5 [GLY] 0:2425 [A] S:6 [GLY] 2:1186 [A2M] ❌ 1VQ8_Q_0
Q:5 [GLY] 0:2389 [U] S:6 [GLY] 2:1153 [OMU] ❌ 1VQ8_Q_0
Q:59 [GLN] 0:2303 [A] S:60 [ARG] 2:1066 [C] ❌ 1VQ8_Q_0
Q:59 [GLN] 0:2304 [G] S:60 [ARG] 2:1067 [G] ❌ 1VQ8_Q_0
Q:6 [PRO] 0:2388 [C] S:7 [TYR] 2:1152 [U] ❌ 1VQ8_Q_0
Q:77 [ASP] 0:2390 [U] S:78 [LYS] 2:1154 [C] ❌ 1VQ8_Q_0
Q:77 [ASP] 0:2395 [A] S:78 [LYS] 2:1157 [G] ❌ 1VQ8_Q_0
Q:77 [ASP] 0:2391 [C] S:78 [LYS] 2:1155 [C] ❌ 1VQ8_Q_0
Q:7 [LEU] 0:2425 [A] S:8 [LYS] 2:1186 [A2M] ❌ 1VQ8_Q_0
Q:82 [LYS] 0:2395 [A] S:87 [LYS] 2:1157 [G] ❌ 1VQ8_Q_0
Q:82 [LYS] 0:2391 [C] S:87 [LYS] 2:1155 [C] ❌ 1VQ8_Q_0
Q:84 [ILE] 0:2388 [C] S:89 [ILE] 2:1152 [U] ❌ 1VQ8_Q_0
Q:21 [ARG] 0:2353 [A] S:22 [HIS] 2:1116 [U] ❌ 6AZ3_2:1116 no longer at interface
Q:21 [ARG] 0:2354 [A] S:22 [HIS] 2:1117 [A] ❌ 6AZ3_2:1117 no longer at interface
Q:67 [GLN] 0:2385 [G] S:68 [THR] 2:1149 [G] ❌ 6AZ3_2:1149 no longer at interface
Q:2 [SER] 0:2313 [C] S:3 [HIS] 2:1076 [G] ❌ 1VQ8_0:2313 no longer at interface
Q:2 [SER] 0:2312 [G] S:3 [HIS] 2:1075 [A] ❌ 1VQ8_0:2312 no longer at interface
Q:69 [ASP] 0:2417 [C] S:70 [ARG] 2:1179 [C] ❌ 1VQ8_0:2417 no longer at interface
Q:69 [ASP] 0:2416 [G] S:70 [ARG] 2:1178 [G] ❌ 1VQ8_0:2416 no longer at interface
Q:87 [THR] 0:2417 [C] S:92 [ARG] 2:1179 [C] ❌ 1VQ8_0:2417 no longer at interface
Q:81 [GLU] 0:2388 [C] S:86 [ARG] 2:1152 [U] ❌ 6AZ3_S:86 no longer at interface
Q:72 [LYS] 0:2386 [U] S:73 [GLY] 2:1150 [A] ❌ 6AZ3_S:73 no longer at interface
Q:78 [GLY] 0:2394 [A] S:79 [PRO] 2:1156 [A] ❌ 6AZ3_S:79 no longer at interface
Q:79 [GLY] 0:2394 [A] S:84 [THR] 2:1156 [A] ❌ 6AZ3_S:84 no longer at interface
Q:20 [ASP] 0:2366 [C] S:21 [LYS] 2:1129 [U] ❌ 6AZ3_S:21 no longer at interface
Q:57 [ASP] 0:2303 [A] S:58 [HIS] 2:1066 [C] ❌ 6AZ3_S:58 no longer at interface
Q:54 [PRO] 0:2303 [A] S:55 [LYS] 2:1066 [C] ❌ 1VQ8_Q:54 no longer at interface
Q:54 [PRO] 0:2305 [A] S:55 [LYS] 2:1068 [A2M] ❌ 1VQ8_Q:54 no longer at interface
Q:54 [PRO] 0:2304 [G] S:55 [LYS] 2:1067 [G] ❌ 1VQ8_Q:54 no longer at interface
Q:64 [GLU] 0:2386 [U] S:65 [TRP] 2:1150 [A] ❌ 1VQ8_Q:64 no longer at interface
Q:71 [TYR] 0:2403 [C] S:72 [VAL] 2:1165 [C] ❌ 1VQ8_Q:71 no longer at interface
Q:86 [VAL] 0:2403 [C] S:91 [VAL] 2:1165 [C] ❌ 1VQ8_Q:86 no longer at interface
Q:86 [VAL] 0:2402 [A] S:91 [VAL] 2:1164 [U] ❌ 1VQ8_Q:86 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
SH3 0.78 1.53 0.23 0.89 0.81 0.85 0.9 0.70 0.61 0.22 0.34


Other pairs involving 1VQ8_Q_0 or 6AZ3_S_2

Total number of entries: 5

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_Q_0 7O7Y_BT_B5 0.67 0.94 1.91 0.22 SH3 compare
1VQ8_Q_0 1YHQ_Q_0 0.99 1.0 0.21 1.0 SH3 Archaeal large subunit ribosomal RNA compare
1VQ8_Q_0 6AZ3_S_2 0.70 0.78 1.53 0.23 SH3 compare
6AZ3_S_2 7O7Y_BT_B5 0.79 0.91 1.52 0.42 SH3 Eukaryotic large subunit ribosomal RNA compare
1YHQ_Q_0 6AZ3_S_2 0.71 0.78 1.51 0.21 SH3 compare